Genome-wide selective sweep analysis
WebFeb 18, 2024 · F ST and ROD analysis and selective sweep detection. ... Zhang, M. Y. & Zhang, S. L. Genome-wide analysis of aluminum-activated malate transporter family genes in six rosaceae species, and ... WebTo better understand the molecular genetic mechanism of egg production in meat-type chicken, genetic parameter estimation, genome-wide association analyses combined with meta-analyses, Bayesian analyses, and selective sweep analyses were performed to screen single nucleotide polymorphisms (SNPs) and other genetic loci that were …
Genome-wide selective sweep analysis
Did you know?
WebApr 13, 2024 · Therefore, the genome-wide analysis of the DIR members in Oryza is important for obtaining beneficial DIR genes and thus for breeding improvements to … WebGenome-wide scan for selective footprints and genes related to cold tolerance in Chantecler chickens. ... (Sinding et al., 2024).Comprehensive analysis of sheep …
WebApr 21, 2015 · From these data a first genome-wide analysis of selection was performed on more than 20,000 annotated genes for 56 M. truncatula accessions, using dN:dS, MK, ... This study reports the first genome-wide selective sweep analysis with high marker density (>15 million SNPs) ... WebDec 20, 2024 · We downloaded the whole-genome re-sequencing data of 96 ducks (62 Mallard and 34 Pekin ducks) and re-analyzed them based on the latest duck reference genome (IASCAAS_Peking Duck_PBH1.5, GCF_003850225.1) to screen for genomic regions and genes that have been under selection based on a selective sweep …
WebIn genetics, a selective sweep is the process through which a new beneficial mutation that increases its frequency and becomes fixed (i.e., reaches a frequency of 1) in the … WebFeb 1, 2024 · A cross-analysis between GWAS and differentially expressed genes (DEGs) in the leaf epidermis of the accessions with contrasting differences in leaf wax content revealed 17 candidate genes that...
WebFeb 2, 2024 · Kijas, J. W. et al. Genome-wide analysis of the world’s sheep breeds reveals high levels of historic mixture and strong recent selection. PLoS Biol. 10 , 1 (2012). Article CAS Google Scholar
WebDec 20, 2024 · We downloaded the whole-genome re-sequencing data of 96 ducks (62 Mallard and 34 Pekin ducks) and re-analyzed them based on the latest duck reference … southside vet gymeaWebCombined results showed that most genes in selective sweep regions were also differentially expressed in Luxi gamecocks including the most significant genes (SLITRK6, IL1RAPL1, GADL1, WISP1, and LRIG3). This study provides more insight into molecular mechanisms of the aggressiveness of gamecocks and aims to promote further studies … teal bobble hatWebJul 26, 2024 · A total of 519 F 2 birds were genome re-sequenced, and a combination of genome-wide association study (GWAS) and selective sweep analysis was carried … teal boat shoesWebSep 3, 2015 · A selective sweep alters the allele frequencies of single nucleotide polymorphisms (SNPs) in the vicinity of the selected allele, and causes (i) reduced local variability, (ii) a distorted pattern of genetic variation, (iii) increased linkage disequilibrium (LD) and (iv) extended haplotype structure [ 13, 14 ]. teal body artWebGenome-wide scan for selective footprints and genes related to cold tolerance in Chantecler chickens. ... (Sinding et al., 2024).Comprehensive analysis of sheep suggests that strong selection of theTBC1D12gene could act as a key point for studying the biological processes and potential mechanisms of genetic adaptation to the environment (Lv et ... southside village rockhamptonWebAug 27, 2024 · Candidate selective sweep analysis for each economic breed. Selective sweeps and their associated genes are shown in three breeds: (A) Saanen, (B) Liaoning … southside vet shelbyville tnWebHere, we investigated genome-wide climate adaptation in giant sequoia and coast redwood, two iconic and ecologically important tree species. We used a combination of univariate and multivariate genotype–environment association methods and a selective sweep analysis using non-overlapping sliding windows. We identified genomic regions of ... southside villas rockhampton